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cspD [2017-8-11 16:0:3]
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cspD [2017-8-11 16:0:3]

cold shock protein
locus
BSU21930
pI
4.31
mw
7.17 kDa
protein length
66 aa Sequence Blast
gene length
198 bp Sequence Blast
function
RNA chaperone
product
cold shock protein
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.2|RNA chaperones]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.5|Cold stress proteins]

    • Gene

    Coordinates
    2,307,905 → 2,308,105

    The protein

    Paralogous protein(s)

  • [protein|16E048FE5AF76CC771DEBBA8CB56B75A5414B3A2|CspB], [protein|D453E1E7D4256B56AFB2149731E08B104D59431B|CspC]

    • Structure

  • [PDB|1C9O] (from ''B. caldolyticus'', 86% identity) [Pubmed|10736231]

    • Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation [Pubmed|17981983]
  • belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]

    • Expression and Regulation

    Operons

    genes
    [gene|0F89D0B03F54B283CDD99A940D43C18E6B5703BB|cspD]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A874 (cspD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/874 NBRP B. subtilis, Japan]

    • two-hybrid system

  • B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in [SW|Stülke] lab

    • References

    Reviews

  • 12171653,12838604

    • Original publications

  • 12399512,11752341,11717297,9920884,12427936,11591689,9379903,17981983,15378759,10736231